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  1. ma-focus ma-focus Public

    MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets

    Python 35 8

  2. susiepca susiepca Public

    Scalable Ultra-Sparse Bayesian PCA

    Python 31 7

  3. twas_sim twas_sim Public

    Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform GWAS/TWAS on complex trait.

    Shell 28 4

  4. sushie sushie Public

    Software to perform multi-ancestry SNP fine-mapping on molecular data

    Linker Script 26 4

  5. FactorGo FactorGo Public

    Software to infer latent pleiotropic components from GWAS summary data

    Python 15

  6. traceax traceax Public

    Stochastic trace estimation using JAX

    Python 15 3

Repositories

Showing 10 of 20 repositories
  • jaxqtl Public

    Flexible, scalable, QTL analyses using generalized linear models implemented in JAX

    mancusolab/jaxqtl’s past year of commit activity
    Python 11 MIT 2 12 0 Updated Sep 8, 2025
  • perturbvi Public
    mancusolab/perturbvi’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 26, 2025
  • traceax Public

    Stochastic trace estimation using JAX

    mancusolab/traceax’s past year of commit activity
    Python 15 Apache-2.0 3 2 1 Updated Aug 20, 2025
  • traceax_analysis Public

    analysis scripts for traceax

    mancusolab/traceax_analysis’s past year of commit activity
    Python 0 0 0 0 Updated Aug 20, 2025
  • sushie Public

    Software to perform multi-ancestry SNP fine-mapping on molecular data

    mancusolab/sushie’s past year of commit activity
    Linker Script 26 MIT 4 0 0 Updated Aug 8, 2025
  • sushie-project-codes Public

    The analysis codes for sushie project

    mancusolab/sushie-project-codes’s past year of commit activity
    R 0 0 0 0 Updated May 31, 2025
  • jaxqtl_analysis Public

    Analysis code for jaxqtl paper

    mancusolab/jaxqtl_analysis’s past year of commit activity
    R 1 MIT 1 0 0 Updated May 7, 2025
  • perturbvi_analysis Public

    Analysis code for perturbvi

    mancusolab/perturbvi_analysis’s past year of commit activity
    R 0 0 0 0 Updated Mar 28, 2025
  • FactorGo Public

    Software to infer latent pleiotropic components from GWAS summary data

    mancusolab/FactorGo’s past year of commit activity
    Python 15 MIT 0 0 0 Updated Jan 30, 2025
  • scfm Public
    mancusolab/scfm’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 2, 2025

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