Skip to content
View inhyeoklee's full-sized avatar

Highlights

  • Pro

Block or report inhyeoklee

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
inhyeoklee/README.md

Welcome to My GitHub! πŸ‘‹

πŸ‘¨πŸ»β€πŸ’» About Me

πŸ’¬ I’m a 2nd-year PhD student in the Beaulieu-Jones Lab at the UChicago Center for Computational Medicine & Clinical AI!

🌱 I investigate interpretable features and biomarkers in clinical AI foundation models via mechanistic interpretability methods.

πŸ“« You can always reach me at: ihlee@uchicago.edu

πŸ”— Connect with Me

Twitter: hyeokomics LinkedIn: inhyeoklee

πŸ› οΈ Languages and Tools

Python R Bash C++ Docker Git Linux Pandas Scikit Learn Seaborn

Pinned Loading

  1. Using-CellChat-for-Ligand-Receptor-Interaction-Analysis Using-CellChat-for-Ligand-Receptor-Interaction-Analysis Public

    This project uses CellChat R package to decipher ligand-receptor network among the cell types of interest.

    R 1

  2. contextual_retriever contextual_retriever Public

    ContextualRetriever enhances document retrieval accuracy by leveraging Voyage AI models for embedding & reranking models, and the GEMINI model for context and retrieval generation.

    Python 1

  3. DNA-LLM DNA-LLM Public

    Jupyter Notebook 1

  4. 10X-Visium-Analysis-for-Spatial-Mapping-of-Gene-Expressions 10X-Visium-Analysis-for-Spatial-Mapping-of-Gene-Expressions Public

    This Jupyter notebook provides a pipeline for spatial analysis using the Scanpy library. The analysis includes data preprocessing, integration, and visualization.

    Jupyter Notebook 1